1058 lines
42 KiB
Bash
Executable File
1058 lines
42 KiB
Bash
Executable File
#!/bin/bash
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############################################################
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# Author : Simona Flavoni for NEMO
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# Contact: sflod@locean-ipsl.upmc.fr
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#
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# sette_test-cases.sh : principal script of SET TEsts for NEMO (SETTE)
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# : this script : compiles, run and tests TEST_CASES
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#
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# : TO DO: test if nitend is equal to end of run.stat
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# ----------------------------------------------------------------------
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# NEMO/SETTE , NEMO Consortium (2018)
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# Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt)
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# ----------------------------------------------------------------------
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#
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#############################################################
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#set -vx
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set -o posix
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#set -u
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#set -e
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# ===========
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# DESCRIPTION
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# ===========
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#
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# Variables to be checked by user:
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#
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# COMPILER : name of compiler as defined in NEMOGCM/ARCH directory
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# BATCH_COMMAND_PAR : name of the command for submitting parallel batch jobs
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# BATCH_COMMAND_SEQ : name of the command for submitting sequential batch jobs
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# INTERACT_FLAG : flag to run in interactive mode "yes"
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# to run in batch mode "no"
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# MPIRUN_FLAG : flag to run in parallel (MPI) "yes"
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# to run in sequential mode (NB_PROC = 1) "no"
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# NUM_XIOSERVERS : number of stand-alone IO servers to employ
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# set to zero if USING_MPMD="no"
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#
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# Principal script is sette_test-cases.sh, that calls
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#
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# makenemo : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
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# and links to nemo in ${CONFIG_NAME}/EXP00)
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#
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# param.cfg : sets and loads following directories:
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# This will have been run by the parent sette.sh and values exported here
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#
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# FORCING_DIR : is the directory for forcing files (tarfile)
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# INPUT_DIR : is the directory for input files storing
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# TMPDIR : is the temporary directory (if needed)
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# NEMO_VALIDATION_DIR : is the validation directory
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#
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# (NOTE: this file is the same for all configrations to be tested with sette_test-cases.sh)
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#
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# all_functions.sh : loads functions used by sette (note: new functions can be added here)
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# set_namelist : function declared in all_functions that sets namelist parameters
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# post_test_tidyup : creates validation storage directory and copies required output files
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# (run.stat and ocean.output) in it after execution of test.
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#
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# VALIDATION tree is:
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#
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# NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
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#
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# prepare_exe_dir.sh : defines and creates directory where the test is executed
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# execution directory takes name of TEST_NAME defined for every test
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# in sette_test-cases.sh. (each test in executed in its own directory)
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#
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# set_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
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#
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# clean_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
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# ( not doing it could lead to false positive )
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#
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# prepare_job.sh : to generate the script run_job.sh
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#
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# fcm_job.sh : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
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# see sette_test-cases.sh and BATCH_TEMPLATE directory
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#
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# NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
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# can be found paths to the input tar file)
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# NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
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# directory
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# NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
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# remain in ${NEW_CONF}/EXP00
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#
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# NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
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# executed commands
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#
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# NOTE: if sette_test-cases.sh is stopped in output.sette there is written the last command
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# executed by sette_test-cases.sh
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#
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# example use: ./sette_test-cases.sh
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#########################################################################################
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#
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# LOAD param value
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SETTE_DIR=$(cd $(dirname "$0"); pwd)
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MAIN_DIR=$(dirname $SETTE_DIR)
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export BATCH_COMMAND_PAR=${BATCH_CMD}
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export BATCH_COMMAND_SEQ=${BATCH_CMD}
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export INTERACT_FLAG="no"
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export MPIRUN_FLAG="yes"
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#
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# Settings which control the use of stand alone servers (only relevant if using xios)
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#
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export NUM_XIOSERVERS=4
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export JOB_PREFIX=${JOB_PREFIX_MPMD}
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#
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if [ ${USING_MPMD} == "no" ]
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then
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export NUM_XIOSERVERS=0
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export JOB_PREFIX=${JOB_PREFIX_NOMPMD}
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fi
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#
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# Directory to run the tests
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CONFIG_DIR0=${MAIN_DIR}/cfgs
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TOOLS_DIR=${MAIN_DIR}/tools
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CMP_NAM=${1:-$COMPILER}
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# Copy job_batch_COMPILER file for specific compiler into job_batch_template
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cd ${SETTE_DIR}
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cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
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# Description of configuration tested:
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# OVERFLOW : TEST s-coordinates : (tracers) Advection schemes: FCT2, FCT4, ubs
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# & (dynamics) advection schemes: flux form (ubs, centered), vector form (een)
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# zps-coordinates : (tracers) Advection schemes: FCT2, FCT4, ubs
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# & (dynamics) advection schemes: flux form (ubs, centered), vector form (een, and een + Hollingsworth correction)
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# LOCK_EXCHANGE :
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# VORTEX :
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# ICE_AGRIF :
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# ISOMIP+ :
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# WAD
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. ./all_functions.sh
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for config in ${TEST_CONFIGS[@]}
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do
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# ---------
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# OVERFLOW
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# ---------
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if [ ${config} == "OVERFLOW" ] ; then
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SETTE_CONFIG="OVERFLOW"${SETTE_STG}
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if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
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then
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ITEND=12
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else
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ITEND=120
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fi
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ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
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cd ${MAIN_DIR}
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#
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#
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clean_config OVERFLOW ${SETTE_CONFIG} 'tests'
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#
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sync_config OVERFLOW ${SETTE_CONFIG} 'tests'
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#
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. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -a OVERFLOW -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
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fi
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if [ ${config} == "OVERFLOW" ] && [ ${DO_RESTART} == "1" ] ; then
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## Restartability tests for OVERFLOW
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export TEST_NAME="LONG"
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cd ${SETTE_DIR}
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. ./prepare_exe_dir.sh
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set_valid_dir
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clean_valid_dir
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JOB_FILE=${EXE_DIR}/run_job.sh
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NPROC=1
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if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
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cd ${EXE_DIR}
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set_namelist namelist_cfg cn_exp \"OVF_LONG\"
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set_namelist namelist_cfg nn_it000 1
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set_namelist namelist_cfg nn_itend ${ITEND}
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set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
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set_namelist namelist_cfg sn_cfctl%l_runstat .true.
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set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
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set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
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set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
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set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
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set_xio_using_server iodef.xml ${USING_MPMD}
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cd ${SETTE_DIR}
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. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
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cd ${SETTE_DIR}
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export TEST_NAME="SHORT"
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. ./prepare_exe_dir.sh
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set_valid_dir
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clean_valid_dir
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cd ${EXE_DIR}
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set_namelist namelist_cfg cn_exp \"OVF_SHORT\"
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set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
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set_namelist namelist_cfg nn_itend ${ITEND}
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set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
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set_namelist namelist_cfg sn_cfctl%l_runstat .true.
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set_namelist namelist_cfg ln_rstart .true.
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set_namelist namelist_cfg nn_rstctl 2
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set_namelist namelist_cfg cn_ocerst_in \"OVF_LONG_${ITRST}_restart\"
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set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
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set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
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set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
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set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
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set_xio_using_server iodef.xml ${USING_MPMD}
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ln -sf ../LONG/OVF_LONG_${ITRST}_restart.nc .
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cd ${SETTE_DIR}
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. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
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cd ${SETTE_DIR}
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. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
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fi
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if [ ${config} == "OVERFLOW" ] && [ ${DO_PHYOPTS} == "1" ] ; then
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## Test for all advection, vert. coordinates, vector form, flux form: test runability and complete all time steps
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## Needed namelist-xxxx for every type of run tested
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if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
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then
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ITEND=12
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else
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ITEND=6120
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fi
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cd ${CONFIG_DIR}/${NEW_CONF}/EXP00
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for file in $(echo `ls namelist_*_cfg `) ; do
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TEST_NAME=`echo $file | sed -e "s/namelist_//" | sed -e "s/_cfg//"`
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TEST_NAME="EXP-${TEST_NAME}"
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if [ ! -d ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME} ] ; then mkdir ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME} ; fi
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export TEST_NAME="${TEST_NAME}"
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##
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cd ${SETTE_DIR}
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. ./prepare_exe_dir.sh
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set_valid_dir
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clean_valid_dir
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JOB_FILE=${EXE_DIR}/run_job.sh
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NPROC=1
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if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
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cd ${EXE_DIR}
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rm namelist_*_*_*_*
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cp -pL ${CONFIG_DIR}/${NEW_CONF}/EXP00/$file namelist_cfg
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set_namelist namelist_cfg nn_it000 1
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set_namelist namelist_cfg nn_itend ${ITEND}
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set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
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set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
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set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
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set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
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set_xio_using_server iodef.xml ${USING_MPMD}
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cd ${SETTE_DIR}
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. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
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cd ${SETTE_DIR}
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. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
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##
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done
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fi
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# --------------
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# LOCK_EXCHANGE
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# --------------
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if [ ${config} == "LOCK_EXCHANGE" ] ; then
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SETTE_CONFIG="LOCK_EXCHANGE"${SETTE_STG}
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if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
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then
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ITEND=12
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else
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ITEND=120
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fi
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ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
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cd ${MAIN_DIR}
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#
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# syncronisation if target directory/file exist (not done by makenemo)
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#
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clean_config LOCK_EXCHANGE ${SETTE_CONFIG} 'tests'
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#
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sync_config LOCK_EXCHANGE ${SETTE_CONFIG} 'tests'
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#
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. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -a LOCK_EXCHANGE -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
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fi
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if [ ${config} == "LOCK_EXCHANGE" ] && [ ${DO_RESTART} == "1" ] ; then
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## Restartability tests for LOCK_EXCHANGE
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export TEST_NAME="LONG"
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cd ${SETTE_DIR}
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. ./prepare_exe_dir.sh
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set_valid_dir
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clean_valid_dir
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JOB_FILE=${EXE_DIR}/run_job.sh
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NPROC=1
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if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
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cd ${EXE_DIR}
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set_namelist namelist_cfg cn_exp \"LOCK_LONG\"
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set_namelist namelist_cfg nn_it000 1
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set_namelist namelist_cfg nn_itend ${ITEND}
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set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
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set_namelist namelist_cfg sn_cfctl%l_runstat .true.
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set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
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set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
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set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
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set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
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set_xio_using_server iodef.xml ${USING_MPMD}
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cd ${SETTE_DIR}
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. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
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cd ${SETTE_DIR}
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export TEST_NAME="SHORT"
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. ./prepare_exe_dir.sh
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set_valid_dir
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clean_valid_dir
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cd ${EXE_DIR}
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set_namelist namelist_cfg cn_exp \"LOCK_SHORT\"
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set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
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set_namelist namelist_cfg nn_itend ${ITEND}
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set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
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set_namelist namelist_cfg sn_cfctl%l_runstat .true.
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set_namelist namelist_cfg ln_rstart .true.
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set_namelist namelist_cfg nn_rstctl 2
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set_namelist namelist_cfg cn_ocerst_in \"LOCK_LONG_${ITRST}_restart\"
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set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
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set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
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set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
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set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
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set_xio_using_server iodef.xml ${USING_MPMD}
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ln -sf ../LONG/LOCK_LONG_${ITRST}_restart.nc .
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cd ${SETTE_DIR}
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. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
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cd ${SETTE_DIR}
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. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
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fi
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if [ ${config} == "LOCK_EXCHANGE" ] && [ ${DO_PHYOPTS} == "1" ] ; then
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## Test for all advection, vector form, flux form: test runability and complete all time steps
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## Needed namelist-xxxx for every type of run tested
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if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
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then
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ITEND=12
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else
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ITEND=61200
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fi
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cd ${CONFIG_DIR}/${NEW_CONF}/EXP00
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for file in $(echo `ls namelist_*_cfg `) ; do
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echo ''
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TEST_NAME=`echo $file | sed -e "s/namelist_//" | sed -e "s/_cfg//"`
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TEST_NAME="EXP-${TEST_NAME}"
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`mkdir ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME}`
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export TEST_NAME="${TEST_NAME}"
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##
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cd ${SETTE_DIR}
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. ./prepare_exe_dir.sh
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set_valid_dir
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clean_valid_dir
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JOB_FILE=${EXE_DIR}/run_job.sh
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NPROC=1
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if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
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cd ${EXE_DIR}
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rm namelist_*_*_*_*
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cp -pL ${CONFIG_DIR}/${NEW_CONF}/EXP00/$file namelist_cfg
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set_namelist namelist_cfg nn_it000 1
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set_namelist namelist_cfg nn_itend ${ITEND}
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set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
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set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
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set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
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set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
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set_xio_using_server iodef.xml ${USING_MPMD}
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cd ${SETTE_DIR}
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. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
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cd ${SETTE_DIR}
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. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
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##
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echo ''
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done
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fi
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# ---------
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# VORTEX
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# ---------
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if [ ${config} == "VORTEX" ] ; then
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SETTE_CONFIG="VORTEX"${SETTE_STG}
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if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
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then
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ITEND=12
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else
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ITEND=240
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fi
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ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
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ITRST_1=$( printf "%08d" $(( ${ITEND} * 3 / 2 )) )
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cd ${MAIN_DIR}
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#
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# syncronisation if target directory/file exist (not done by makenemo)
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#
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clean_config VORTEX ${SETTE_CONFIG} 'tests'
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#
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sync_config VORTEX ${SETTE_CONFIG} 'tests'
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#
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. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -a VORTEX -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
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fi
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if [ ${config} == "VORTEX" ] && [ ${DO_RESTART} == "1" ] ; then
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## Restartability tests for VORTEX
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export TEST_NAME="LONG"
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cd ${SETTE_DIR}
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. ./prepare_exe_dir.sh
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set_valid_dir
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clean_valid_dir
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JOB_FILE=${EXE_DIR}/run_job.sh
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NPROC=6
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if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
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cd ${EXE_DIR}
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set_namelist namelist_cfg cn_exp \"VORTEX_LONG\"
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set_namelist namelist_cfg nn_it000 1
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set_namelist namelist_cfg nn_itend ${ITEND}
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set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"VORTEX_LONG\"
|
|
set_namelist 1_namelist_cfg nn_it000 1
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="SHORT"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"VORTEX_SHORT\"
|
|
set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist namelist_cfg ln_rstart .true.
|
|
set_namelist namelist_cfg nn_rstctl 2
|
|
set_namelist namelist_cfg cn_ocerst_in \"VORTEX_LONG_${ITRST}_restart\"
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"VORTEX_SHORT\"
|
|
set_namelist 1_namelist_cfg nn_it000 $(( ${ITEND} * 3 / 2 + 1 ))
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist 1_namelist_cfg ln_rstart .true.
|
|
set_namelist 1_namelist_cfg nn_rstctl 2
|
|
set_namelist 1_namelist_cfg cn_ocerst_in \"VORTEX_LONG_${ITRST_1}_restart\"
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
if [ $NPROC -eq 1 ] ; then
|
|
ln -sf ../LONG/VORTEX_LONG_${ITRST}_restart.nc .
|
|
ln -sf ../LONG/1_VORTEX_LONG_${ITRST_1}_restart.nc .
|
|
else
|
|
for (( i=1; i<=$NPROC; i++)) ; do
|
|
L_NPROC=$(( $i - 1 ))
|
|
L_NPROC=`printf "%04d\n" ${L_NPROC}`
|
|
ln -sf ../LONG/VORTEX_LONG_${ITRST}_restart_${L_NPROC}.nc .
|
|
ln -sf ../LONG/1_VORTEX_LONG_${ITRST_1}_restart_${L_NPROC}.nc .
|
|
done
|
|
fi
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
fi
|
|
|
|
if [ ${config} == "VORTEX" ] && [ ${DO_REPRO} == "1" ] ; then
|
|
|
|
## Reproducibility tests for VORTEX
|
|
export TEST_NAME="REPRO_2_3"
|
|
cd ${MAIN_DIR}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=6
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"VORTEX_23\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock ${ITEND}
|
|
set_namelist namelist_cfg jpni 2
|
|
set_namelist namelist_cfg jpnj 3
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
#if [ ${USING_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"VORTEX_23\"
|
|
set_namelist 1_namelist_cfg nn_it000 1
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg jpni 2
|
|
set_namelist 1_namelist_cfg jpnj 3
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
if [ ${USING_MPMD} == "yes" ] ; then
|
|
set_xio_using_server iodef.xml true
|
|
else
|
|
set_xio_using_server iodef.xml false
|
|
fi
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="REPRO_3_2"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=6
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
|
|
set_namelist namelist_cfg cn_exp \"VORTEX_32\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock ${ITEND}
|
|
set_namelist namelist_cfg jpni 3
|
|
set_namelist namelist_cfg jpnj 2
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"VORTEX_32\"
|
|
set_namelist 1_namelist_cfg nn_it000 1
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg jpni 3
|
|
set_namelist 1_namelist_cfg jpnj 2
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
fi
|
|
|
|
|
|
# ---------
|
|
# ICE_AGRIF
|
|
# ---------
|
|
if [ ${config} == "ICE_AGRIF" ] ; then
|
|
SETTE_CONFIG="ICE_AGRIF"${SETTE_STG}
|
|
if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
|
|
then
|
|
ITEND=10
|
|
else
|
|
ITEND=200
|
|
fi
|
|
ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
|
|
ITRST_1=$( printf "%08d" $(( ${ITEND} * 3 / 2 )) )
|
|
cd ${MAIN_DIR}
|
|
#
|
|
# syncronisation if target directory/file exist (not done by makenemo)
|
|
#
|
|
clean_config ICE_AGRIF ${SETTE_CONFIG} 'tests'
|
|
#
|
|
sync_config ICE_AGRIF ${SETTE_CONFIG} 'tests'
|
|
#
|
|
# ICE_AGRIF uses linssh so remove key_qco if added by default
|
|
. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -a ICE_AGRIF -j ${CMPL_CORES} add_key "${ADD_KEYS/key_qco/}" del_key "${DEL_KEYS}"
|
|
fi
|
|
if [ ${config} == "ICE_AGRIF" ] && [ ${DO_RESTART} == "1" ] ; then
|
|
## Restartability tests for ICE_AGRIF
|
|
export TEST_NAME="LONG"
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=6
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"ICE_AGRIF_LONG\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_LONG\"
|
|
set_namelist 1_namelist_cfg nn_it000 1
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="SHORT"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"ICE_AGRIF_SHORT\"
|
|
set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist namelist_cfg ln_rstart .true.
|
|
set_namelist namelist_cfg nn_rstctl 2
|
|
set_namelist namelist_cfg cn_ocerst_in \"ICE_AGRIF_LONG_${ITRST}_restart\"
|
|
set_namelist namelist_ice_cfg cn_icerst_in \"ICE_AGRIF_LONG_${ITRST}_restart_ice\"
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_SHORT\"
|
|
set_namelist 1_namelist_cfg nn_it000 $(( ${ITEND} * 3 / 2 + 1 ))
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist 1_namelist_cfg ln_rstart .true.
|
|
set_namelist 1_namelist_cfg nn_rstctl 2
|
|
set_namelist 1_namelist_cfg cn_ocerst_in \"ICE_AGRIF_LONG_${ITRST_1}_restart\"
|
|
set_namelist 1_namelist_ice_cfg cn_icerst_in \"ICE_AGRIF_LONG_${ITRST_1}_restart_ice\"
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
if [ $NPROC -eq 1 ] ; then
|
|
ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart.nc .
|
|
ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart_ice.nc .
|
|
ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart.nc .
|
|
ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart_ice.nc .
|
|
else
|
|
for (( i=1; i<=$NPROC; i++)) ; do
|
|
L_NPROC=$(( $i - 1 ))
|
|
L_NPROC=`printf "%04d\n" ${L_NPROC}`
|
|
ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart_${L_NPROC}.nc .
|
|
ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart_ice_${L_NPROC}.nc .
|
|
ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart_${L_NPROC}.nc .
|
|
ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart_ice_${L_NPROC}.nc .
|
|
done
|
|
fi
|
|
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
fi
|
|
|
|
if [ ${config} == "ICE_AGRIF" ] && [ ${DO_REPRO} == "1" ] ; then
|
|
|
|
## Reproducibility tests for ICE_AGRIF
|
|
export TEST_NAME="REPRO_2_3"
|
|
cd ${MAIN_DIR}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=6
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"ICE_AGRIF_23\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg jpni 2
|
|
set_namelist namelist_cfg jpnj 3
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_23\"
|
|
set_namelist 1_namelist_cfg nn_it000 1
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
|
|
set_namelist 1_namelist_cfg jpni 2
|
|
set_namelist 1_namelist_cfg jpnj 3
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="REPRO_3_2"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=6
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
|
|
set_namelist namelist_cfg cn_exp \"ICE_AGRIF_32\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg jpni 3
|
|
set_namelist namelist_cfg jpnj 2
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_32\"
|
|
set_namelist 1_namelist_cfg nn_it000 1
|
|
set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
|
|
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
|
|
set_namelist 1_namelist_cfg jpni 3
|
|
set_namelist 1_namelist_cfg jpnj 2
|
|
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
fi
|
|
|
|
# ------
|
|
# ISOMIP+
|
|
# ------
|
|
if [ ${config} == "ISOMIP+" ] ; then
|
|
SETTE_CONFIG="ISOMIP+"${SETTE_STG}
|
|
if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
|
|
then
|
|
ITEND=12
|
|
else
|
|
ITEND=1200
|
|
fi
|
|
ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
|
|
cd ${MAIN_DIR}
|
|
#
|
|
# syncronisation if target directory/file exist (not done by makenemo)
|
|
#
|
|
clean_config ISOMIP+ ${SETTE_CONFIG} 'tests'
|
|
#
|
|
sync_config ISOMIP+ ${SETTE_CONFIG} 'tests'
|
|
#
|
|
# ISOMIP+ uses ln_hpg_isf so remove key_qco if added by default
|
|
. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -a ISOMIP+ -j ${CMPL_CORES} add_key "${ADD_KEYS/key_qco/}" del_key "${DEL_KEYS}"
|
|
fi
|
|
if [ ${config} == "ISOMIP+" ] && [ ${DO_RESTART} == "1" ] ; then
|
|
## Restartability tests
|
|
export TEST_NAME="LONG"
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=27
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"ISOMIP+_LONG\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg jpni 9
|
|
set_namelist namelist_cfg jpnj 3
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="SHORT"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"ISOMIP+_SHORT\"
|
|
set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg ln_rstart .true.
|
|
set_namelist namelist_cfg nn_rstctl 2
|
|
set_namelist namelist_cfg jpni 9
|
|
set_namelist namelist_cfg jpnj 3
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist namelist_cfg cn_ocerst_in \"ISOMIP+_LONG_${ITRST}_restart\"
|
|
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
for (( i=1; i<=$NPROC; i++)) ; do
|
|
L_NPROC=$(( $i - 1 ))
|
|
L_NPROC=`printf "%04d\n" ${L_NPROC}`
|
|
ln -sf ../LONG/ISOMIP+_LONG_${ITRST}_restart_${L_NPROC}.nc .
|
|
done
|
|
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
fi
|
|
|
|
if [ ${config} == "ISOMIP+" ] && [ ${DO_REPRO} == "1" ] ; then
|
|
## Reproducibility tests
|
|
if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
|
|
then
|
|
ITEND=12
|
|
else
|
|
ITEND=600
|
|
fi
|
|
export TEST_NAME="REPRO_9_3"
|
|
cd ${MAIN_DIR}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=27
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"ISOMIP+_93\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg jpni 9
|
|
set_namelist namelist_cfg jpnj 3
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="REPRO_8_4"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=32
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"ISOMIP+_84\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg jpni 8
|
|
set_namelist namelist_cfg jpnj 4
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
fi
|
|
|
|
|
|
# ---------
|
|
# SWG
|
|
# ---------
|
|
if [ ${config} == "SWG" ] && [ ${USING_QCO} == "yes" ] ; then
|
|
SETTE_CONFIG="SWG"${SETTE_STG}
|
|
if [ $( echo ${CMP_NAM} | grep -ic debug ) -eq 1 ]
|
|
then
|
|
ITEND=12
|
|
else
|
|
ITEND=1728
|
|
fi
|
|
ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
|
|
cd ${MAIN_DIR}
|
|
#
|
|
# syncronisation if target directory/file exist (not done by makenemo)
|
|
#
|
|
clean_config SWG ${SETTE_CONFIG} 'tests'
|
|
#
|
|
sync_config SWG ${SETTE_CONFIG} 'tests'
|
|
#
|
|
. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -a SWG -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
|
|
fi
|
|
if [ ${config} == "SWG" ] && [ ${DO_RESTART} == "1" ] && [ ${USING_QCO} == "yes" ] ; then
|
|
## Restartability tests for SWG
|
|
export TEST_NAME="LONG"
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=1
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"SWG_LONG\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="SHORT"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"SWG_SHORT\"
|
|
set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist namelist_cfg ln_rstart .true.
|
|
set_namelist namelist_cfg nn_rstctl 2
|
|
set_namelist namelist_cfg cn_ocerst_in \"SWG_LONG_${ITRST}_restart\"
|
|
|
|
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
if [ $NPROC -eq 1 ] ; then
|
|
ln -sf ../LONG/SWG_LONG_${ITRST}_restart.nc .
|
|
else
|
|
for (( i=1; i<=$NPROC; i++)) ; do
|
|
L_NPROC=$(( $i - 1 ))
|
|
L_NPROC=`printf "%04d\n" ${L_NPROC}`
|
|
ln -sf ../LONG/SWG_LONG_${ITRST}_restart_${L_NPROC}.nc .
|
|
done
|
|
fi
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
fi
|
|
|
|
if [ ${config} == "SWG" ] && [ ${DO_REPRO} == "1" ] && [ ${USING_QCO} == "yes" ] ; then
|
|
|
|
## Reproducibility tests for SWG
|
|
export TEST_NAME="REPRO_2_3"
|
|
cd ${MAIN_DIR}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=6
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
set_namelist namelist_cfg cn_exp \"SWG_23\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock ${ITEND}
|
|
set_namelist namelist_cfg jpni 2
|
|
set_namelist namelist_cfg jpnj 3
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist namelist_cfg sn_cfctl%l_prtctl .true.
|
|
|
|
|
|
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
cd ${SETTE_DIR}
|
|
export TEST_NAME="REPRO_3_2"
|
|
. ./prepare_exe_dir.sh
|
|
set_valid_dir
|
|
clean_valid_dir
|
|
JOB_FILE=${EXE_DIR}/run_job.sh
|
|
NPROC=6
|
|
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
|
|
cd ${EXE_DIR}
|
|
|
|
set_namelist namelist_cfg cn_exp \"SWG_32\"
|
|
set_namelist namelist_cfg nn_it000 1
|
|
set_namelist namelist_cfg nn_itend ${ITEND}
|
|
set_namelist namelist_cfg nn_stock ${ITEND}
|
|
set_namelist namelist_cfg jpni 3
|
|
set_namelist namelist_cfg jpnj 2
|
|
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
|
|
set_namelist namelist_cfg sn_cfctl%l_prtctl .true.
|
|
|
|
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
|
|
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
|
|
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
|
|
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
|
|
set_xio_using_server iodef.xml ${USING_MPMD}
|
|
cd ${SETTE_DIR}
|
|
. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
|
|
cd ${SETTE_DIR}
|
|
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
|
|
|
|
fi
|
|
|
|
|
|
|
|
#----
|
|
done
|
|
#
|
|
# Return to SETTE_DIR (last fcm_job.sh will have moved to EXE_DIR)
|
|
cd ${SETTE_DIR}
|