76 lines
1.7 KiB
Bash
Executable File
76 lines
1.7 KiB
Bash
Executable File
#!/usr/bin/env bash
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#SBATCH -J sette
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#SBATCH -o sette.%j.out
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#SBATCH -e sette.%j.err
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#SBATCH -N NODES
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#SBATCH --ntasks-per-node=NPROC_NODE
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#SBATCH -p mono
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#SBATCH -q normal
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#SBATCH --time=01:00:00
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#SBATCH --exclusive
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# Test specific settings. Do not hand edit these lines; the fcm_job.sh script will set these
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# (via sed operating on this template job file).
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#
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OCEANCORES=NPROCS
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export SETTE_DIR=DEF_SETTE_DIR
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###############################################################
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#
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export MPIRUN="mpirun --map-by node --bind-to core"
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#
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# load sette functions (only post_test_tidyup needed)
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. ${SETTE_DIR}/all_functions.sh
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# modules to load
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module purge
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module load gcc/9.3.0 openmpi/4.0.5_gcc9.3.0 hdf5/1.8.18_gcc9.3.0 netcdf/4.7.1_gcc9.3.0 xios/trunk_rev2136_gcc9.3.0
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export XIO_HOME=${XIOS_DIR}
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# Don't remove neither change the following line
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# BODY
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#
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# These variables are needed by post_test_tidyup function in all_functions.sh
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#
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export INPUT_DIR=DEF_INPUT_DIR
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export CONFIG_DIR=DEF_CONFIG_DIR
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export TOOLS_DIR=DEF_TOOLS_DIR
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export NEMO_VALIDATION_DIR=DEF_NEMO_VALIDATION
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export NEW_CONF=DEF_NEW_CONF
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export CMP_NAM=DEF_CMP_NAM
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export TEST_NAME=DEF_TEST_NAME
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export EXE_DIR=DEF_EXE_DIR
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ulimit -a
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ulimit -s unlimited
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#
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# end of set up
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###############################################################
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#
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# change to the working directory
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#
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cd ${EXE_DIR}
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echo Running on host `hostname`
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echo Time is `date`
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echo Directory is `pwd`
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#
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# Run the parallel MPI executable
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#
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echo "Running time ${MPIRUN} ./nemo"
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#
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if [ MPI_FLAG == "yes" ]; then
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${MPIRUN} -n $OCEANCORES ./nemo
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else
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time ./nemo
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fi
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#
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post_test_tidyup
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# END_BODY
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# Don't remove neither change the previous line
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exit
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