91 lines
1.9 KiB
Bash
Executable File
91 lines
1.9 KiB
Bash
Executable File
#!/bin/bash
|
|
#!
|
|
# @ shell = /usr/bin/ksh
|
|
# @ job_name = MPI_config
|
|
# @ output = out.$(job_name).$(jobid)
|
|
# @ error = err.$(job_name).$(jobid)
|
|
# @ job_type = parallel
|
|
# @ total_tasks = NPROCS
|
|
# @ wall_clock_limit = 0:30:00
|
|
# @ resources = ConsumableMemory(1562mb)
|
|
# @ class = parallel
|
|
# @ node_usage = shared
|
|
# @ notification = error
|
|
# @ task_affinity = core
|
|
# @ queue
|
|
|
|
ulimit -c unlimited
|
|
ulimit -s unlimited
|
|
#
|
|
# Test specific settings. Do not hand edit these lines; the fcm_job.sh script will set these
|
|
# (via sed operating on this template job file).
|
|
#
|
|
OCEANCORES=NPROCS
|
|
export SETTE_DIR=DEF_SETTE_DIR
|
|
|
|
###############################################################
|
|
#
|
|
# set up mpp computing environment
|
|
#
|
|
# Local settings for machine IBM Power7 (hpc2e at UK Met Office)
|
|
#
|
|
export MPIRUN="poe -pgmodel $MP_PGMMODEL -n $OCEANCORES -cmdfile"
|
|
|
|
#
|
|
# load sette functions (only post_test_tidyup needed)
|
|
#
|
|
. ${SETTE_DIR}/all_functions.sh
|
|
|
|
# Don't remove neither change the following comment line
|
|
# BODY
|
|
|
|
|
|
#
|
|
# These variables are needed by post_test_tidyup function in all_functions.sh
|
|
#
|
|
export EXE_DIR=DEF_EXE_DIR
|
|
export INPUT_DIR=DEF_INPUT_DIR
|
|
export CONFIG_DIR=DEF_CONFIG_DIR
|
|
export TOOLS_DIR=DEF_TOOLS_DIR
|
|
export NEMO_VALIDATION_DIR=DEF_NEMO_VALIDATION
|
|
export NEW_CONF=DEF_NEW_CONF
|
|
export CMP_NAM=DEF_CMP_NAM
|
|
export TEST_NAME=DEF_TEST_NAME
|
|
#
|
|
# end of set up
|
|
|
|
|
|
###############################################################
|
|
#
|
|
# change to the working directory
|
|
#
|
|
cd ${EXE_DIR}
|
|
|
|
echo Running on host `hostname`
|
|
echo Time is `date`
|
|
echo Directory is `pwd`
|
|
#
|
|
# Run the parallel MPI executable
|
|
#
|
|
if [ MPI_FLAG == "yes" ]; then
|
|
n=1
|
|
echo "./nemo" > ./alltasks
|
|
while [ $n -lt $OCEANCORES ]
|
|
do
|
|
echo "./nemo" >> ./alltasks
|
|
n=$(( $n + 1 ))
|
|
done
|
|
time ${MPIRUN} ./alltasks
|
|
else
|
|
time ./nemo
|
|
fi
|
|
|
|
|
|
#
|
|
post_test_tidyup
|
|
|
|
# END_BODY
|
|
# Don't remove neither change the previous comment line
|
|
|
|
exit
|